Brown Sugar Carrot Cupcakes With Cream Cheese Frosting


Last Updated: Mar, 31, 2026 by Mimi Council | This post may contain affiliate links.

This recipe for Brown Sugar Carrot Cupcakes With Cream Cheese Frosting are the perfect fall cupcake! Moist and fluffy carrot cupcakes have a rich caramel undertone from the brown sugar that pairs perfectly with tangy cream cheese frosting.

If you love carrot cake as much as I do, check out Vegan Strawberry Carrot Cake, Eggless Chocolate Carrot Cake, Sourdough Carrot Snack Cake, Orange Ginger Carrot Cake, or Best Carrot Cake Recipes.

unwrapped brown sugar carrot cupcake on a plate.

A Quick Look At The Recipe

  • Recipe Name: Brown Sugar Carrot Cupcakes With Cream Cheese Frosting
  • Ready In: 1 hour 35 minutes
  • Makes: 12 cupcakes
  • Main Ingredients: carrots, salted butter, light brown sugar, powdered sugar
  • Flavor Profile: cozy carrot cupcakes with creamy brown sugar frosting
  • Dietary Info: gluten free swap available
  • Difficulty: Easy!
  • Why You’ll Love It: a classic favorite into something extra comforting and cozy

Why You'll Love This Recipe

  • Elevated Classic: This recipe for Brown Sugar Carrot Cupcakes With Cream Cheese Frosting is an elevated twist on classic carrot cupcakes. With the addition of brown sugar, these organic cupcakes are a rich and more decadent version.
  • Cream Cheese Frosting: If you're a fan of cream cheese frosting, you'll love this recipe! The tang of the cream cheese forsting pairs so well with the rich carrot cake.
  • Easy AF: I love this recipe because it's one bowl kind of cake. You can use your stand mixer, hand mixer, or even a bowl with a spatula to mix it up!
  • Organic Cupcakes: While you can get carrot cupcakes at most bakeries or even grocery store bakeries, making your own at home with organic ingredients will give you a higher quality and more delicious treat!
Jump to:

Carrot cake was the very first cake recipe I developed on my own. I made it for my husband's birthday the first year we were dating, and friends requested it for every birthday after! That recipe was served in my bakery for over a decade, and it's in my book The Mountain Baker.

This carrot cake is very similar, but it's even richer with the addition of brown sugar. Delaney and I have become obsessed with these carrot cupcakes! While carrot cake can be enjoyed year round, I feel this recipe is fall inspired with the addition of the brown sugar and ginger. They just have a cozy vibe, kinda like Snickerdoodle Biscotti, Chewy Rye Chocolate Chip Cookies, Small Batch Maple Brown Sugar Cookies, and Sourdough Apple Pie, which are all wonderful fall desserts!

These are also a great recipe for Easter along with Chocolate Peanut Butter Eggs With Bone Broth, Dark Chocolate Coconut Almond Butter Eggs, Easter Banana Blondies, Easter Egg Thumbprint Cookies, or Organic Easter Bunny Cake.

Ingredients

individual ingredients for brown sugar carrot cupcakes laid out against a white background.
  • All Purpose Flour: I use organic all purpose flour instead of cake flour because these carrot cupcakes are incredibly moist with the grated carrots already, so all purpose flour gives them more structure.
  • Cinnamon: I always add cinnamon into my carrot cupcakes. My favorite is organic Korintje cinnamon. Read more about the Best Cinnamon to Bake With and the different varieties.
  • Baking Powder: Use baking powder, not soda. Be sure to check out my post the Difference Between Baking Soda and Baking Powder for more info on leavening agents.
  • Carrots: I use organic carrots that are finely grated. Be sure to use a fine grater. While using a large grater may seem faster, the larger grate won't bake into the cupcakes as well and may result in a gummy texture that is not ideal.
  • Light Brown Sugar: I use my homemade light brown sugar, but store bought is also fine. This creates more moist carrot cupcakes.
  • Canola Oil: I use organic canola oil as its the most neutral oil. If you are avoiding seed oils, then you can use avocado oil or EVOO.

*For a full list of ingredients and measurements, visit the recipe card below.

Baker's Tips for Brown Sugar Carrot Cupcakes with Cream Cheese Frosting

  • Always weigh your ingredients for the best results.
  • Use a fine grater for grating the carrots. This will help give the best texture in your carrot cake.
  • You can make the carrot cake batter in a mixing bowl, with a hand mixer or in a stand mixer. It's a super flexible recipe and comes together easily.
  • Make sure you are using the best cinnamon – as cinnamon is an important ingredient in carrot cake.
  • You do not need to frost these with a piping bag, you can also just use a spatula or butter knife.
  • Because these are topped with cream cheese frosting, they need to be stored in the fridge. They should also still be in an airtight container as well.
  • Gluten Free — Replace the all purpose flour with 191 grams (scant 1 ¼ cups) gluten free flour blend.

How to Make Brown Sugar Carrot Cupcakes With Cream Cheese Frosting

glass mixing bowl on a white marble counter with grated carrots.
  1. Preheat the oven to 350°F. Line a cupcake liner with cupcake liners. To make the batter: Grate the carrots using a fine grater and add into a large mixing bowl.
wet ingredients for brown sugar carrot cupcakes in a glass mixing bowl on a white marble counter.
  1. Add the canola oil, light brown sugar, cane sugar, and eggs.
wet ingredients mixed together for brown sugar carrot cupcakes in a glass mixing bowl on a white marble counter.
  1. Mix on low until combined.
all ingredients for brown sugar carrot cupcakes in a glass mixing bowl on a white marble counter.
  1. Add in the flour, baking powder, salt, cinnamon, and nutmeg.
brown sugar carrot cupcake batter in a glass mixing bowl on a white marble counter.
  1. Step 5: Remove and add to serving plate
cupcake pan with brown sugar carrot cupcake batter on a white marble counter.
  1. Scoop cupcake batter into the cupcake pan, fill them three-quarters full.
baked brown sugar carrot cupcakes in a cupcake pan on top of a stovetop.
  1. Bake for 20 minutes or until a wooden pick inserted in the center comes out clean. Allow to cool completely in the cupcake pans.
ingredients for cream cheese frosting in a glass stand mixing bowl on a white marble counter.
  1. To make the frosting: In the bowl of a stand mixer fitted with the paddle attachment, add the butter, cream cheese, powdered sugar, and vanilla extract.
cream cheese frosting in a glass stand mixing bowl on a white marble counter.
  1. Mix on low to combine, then speed mixer up to high for 2 to 3 minutes or until light and fluffy. Make sure to scrape down the sides of the bowl part way through mixing to ensure you have a smooth frosting.
brown sugar carrot cupcakes on a green plate on a white marble counter with a vase of flowers.
  1. Transfer to a piping bag with Ateco tip #808. Frost cupcakes by piping a large dollop on top.
brown sugar carrot cupcake with cream cheese frosting on a plate.

Recipe FAQ's

Can I use a larger grater for the carrots?

No, do not do this. Using a larger grater may seem like a good idea at first as you can grate the carrots faster. But, it's not ideal for carrot cake recipes because the large pieces of carrot do not cook and incorporate into the batter the same way as the small ones do. This can result in a gummy cake texture that is not uniform and is not tasty. So, take the extra time, use the fine grater.

Do I need a stand mixer to make carrot cupcakes?

No, you don't need a stand mixer to make this recipe. You can make the batter with just a bowl and a whisk or you can use a hand mixer. You will need at least a hand mixer to make the frosting because you'll need to whip it up so it's light and fluffy.

Can I make carrot cupcakes ahead of time?

Yes, if you need to bake these a day ahead of your party that's totally okay! Just be sure to store them in the fridge because they are made with cream cheese frosting.

How should I store carrot cupcakes?

Because this recipe has a cream cheese frosting, you have to store these cupcakes in the fridge.

brown sugar carrot cupcake on a plate with a bite taken out of it.

More Cupcake Recipes

Thanks a waffle lot for stopping by 🧇 If you loved this recipe, sprinkle some love by leaving a ⭐⭐⭐⭐⭐ review — it inspires others to try this recipe and helps me organically reach dog loving foodies like you! I personally read and appreciate every message!

Also, be sure to subscribe to our YouTube channel and join John John and me in the kitchen for step by step recipe videos! And subscribe to our newsletter for new and seasonal recipes!

unwrapped brown sugar carrot cupcake on a plate.

Brown Sugar Carrot Cupcakes With Cream Cheese Frosting

Mimi Council
This moist carrot cake has a richer flavor than most because it's made with brown sugar. This delicious carrot cupcake is topped with a cream cheese frosting.
5 from 2 votes
Prep Time 15 minutes
Cook Time 20 minutes
Cooling Time 1 hour
Total Time 1 hour 35 minutes
Course Dessert
Cuisine American
Makes 12 cupcakes
Calories 441 kcal

Equipment

  • Digital Food Scale
  • Stand Mixer
  • Cupcake Pans
  • Cupcake Liners

Ingredients
 
 

Batter

  • 170 grams carrots (finely grated)
  • ½ cup canola oil
  • 113 grams light brown sugar (packed)
  • 113 grams cane sugar
  • 2 large eggs
  • 191 grams all purpose flour
  • ¾ teaspoon baking powder
  • ½ teaspoon fine sea salt
  • 1 teaspoon ground cinnamon
  • ¼ teaspoon ground nutmeg

Frosting

  • 113 grams salted butter (softened)
  • 113 grams cream cheese
  • 340 grams powdered sugar (sifted)
  • 1 teaspoon vanilla extract

Instructions
 

  • Preheat the oven to 350°F. Line a cupcake liner with cupcake liners.
  • To make the batter: Grate the carrots using a fine grater and add into a large mixing bowl.
  • Add the canola oil, light brown sugar, cane sugar, and eggs.
  • Mix on low until combined.
  • Add in the flour, baking powder, salt, cinnamon, and nutmeg.
  • Scoop cupcake batter into the cupcake pan, fill them three-quarters full.
  • Bake for 20 minutes or until a wooden pick inserted in the center comes out clean. Allow to cool completely in the cupcake pans.
  • To make the frosting: In the bowl of a stand mixer fitted with the paddle attachment, add the butter, cream cheese, powdered sugar, and vanilla extract.
  • Mix on low to combine, then speed mixer up to high for 2 to 3 minutes or until light and fluffy. Make sure to scrape down the sides of the bowl part way through mixing to ensure you have a smooth frosting.
  • Transfer to a piping bag with Ateco tip #808. Frost cupcakes by piping a large dollop on top.
  • Store under a cake dome or in an airtight container in the fridge for up to 3 days.

Video

YouTube video

Notes

Tips
  • Always weigh your ingredients for the best results.
  • Use a fine grater for grating the carrots. This will help give the best texture in your carrot cake.
  • You can make the carrot cake batter in a mixing bowl, with a hand mixer or in a stand mixer. It's a super flexible recipe and comes together easily.
  • Make sure you are using the best cinnamon – as cinnamon is an important ingredient in carrot cake.
  • You do not need to frost these with a piping bag, you can also just use a spatula or butter knife.
  • Because these are topped with cream cheese frosting, they need to be stored in the fridge. They should also still be in an airtight container as well.
  • Gluten Free — Replace the all purpose flour with 191 grams (scant 1 ¼ cups) gluten free flour blend.
  • High Altitude — Bake at 350°F for 17 minutes or until a wooden pick inserted in the center comes out clean.

Nutrition

Calories: 441kcalCarbohydrates: 61gProtein: 3gFat: 21gSaturated Fat: 8gPolyunsaturated Fat: 3gMonounsaturated Fat: 9gTrans Fat: 0.3gCholesterol: 57mgSodium: 237mgPotassium: 102mgFiber: 1gSugar: 47gVitamin A: 2769IUVitamin C: 1mgCalcium: 47mgIron: 1mg
Want more recipes?Follow along on @mimisorganiceats for more inspiration!

The Bake Shop

Visit The Bake Shop for foodie inspired tees, sweatshirts, and accessories. Find my favorite kitchen tools (with discounts!) in the Kitchen Shop. And shop our collection of food inspired dog accessories too!

Mimi Council in the kitchen

3 responses to “Brown Sugar Carrot Cupcakes With Cream Cheese Frosting”

  1. Mimi Council says:

    5 stars
    I love the brown sugar in this carrot cake recipe, it adds so much flavor!

  2. Teresa Frazier-Clark says:

    5 stars
    These Brown Sugar Carrot Cupcakes are soft, warmly spiced, and perfectly moist, with a rich caramel taste from the brown sugar. The cream cheese frosting is smooth, and just sweet enough, basically the perfect match. They’re cozy, delicious, and my family devoured them! Will definitely make these again!

Leave a Reply

Your email address will not be published. Required fields are marked *

Recipe Rating